Marc Joyeux - Publications

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93 -	Transcribing RNA polymerases: Dynamics of Twin Supercoiled Domains M. Joyeux Biophysical Journal, in press [full text] copyright : Elsevier ([Abstract])
92 -	Tethered Particle Motion technique in crowded media: Compaction of DNA by globular macromolecules M. Joyeux Journal of Physical Chemistry B, 128 (2024) 7227-7236 [full text] copyright : The American Chemical Society ([Abstract])
91 -	Organization of the bacterial nucleoid by DNA-bridging proteins and globular crowders M. Joyeux Frontiers in Microbiology, 14 (2023) 1116776 (1-12) [full text] [Abstract]
90 -	Models of topological barriers and molecular motors of bacterial DNA M. Joyeux Molecular Simulation, 48 (2022) 1688-1696 [full text] copyright : Taylor & Francis ([Abstract])
89 -	Impact of self-association on the architectural properties of bacterial nucleoid proteins M. Joyeux Biophysical Journal, 120 (2021) 370-378 [full text] copyright : Elsevier ([Abstract])
88 -	Requirements for DNA-bridging proteins to act as topological barriers of the bacterial genome M. Joyeux and I. Junier Biophysical Journal, 119 (2020) 1215-1225 [full text] copyright : Elsevier ([Abstract])
87 -	Bacterial nucleoid : Interplay of DNA demixing and supercoiling M. Joyeux Biophysical Journal, 118 (2020) 2141-2150 [full text] copyright : Elsevier ([Abstract])
86 -	Preferential localization of the bacterial nucleoid M. Joyeux Microorganisms, 7 (2019) 204 (1-20) [full text] [Abstract]
85 -	A segregative phase separation scenario of the formation of the bacterial nucleoid M. Joyeux Soft Matter, 14 (2018) 7368-7381 [Abstract] [Ask for an electronic reprint by email] [arXiv preprint]
84 -	Role of salt valency in the switch of H-NS proteins between DNA-bridging and DNA-stiffening modes M. Joyeux Biophysical Journal, 114 (2018) 2317-2325 [full text] copyright : Elsevier ([Abstract])
83 -	Coarse-grained model of the demixing of DNA and non-binding globular macromolecules M. Joyeux Journal of Physical Chemistry B, 121 (2017) 6351-6358 [full text] copyright : The American Chemical Society ([Abstract])
82 -	Recovery of mechanical pressure in a gas of underdamped active dumbbells with Brownian noise M. Joyeux Physical Review E, 95 (2017) 052603 (1-13) [full text] copyright : The American Physical Society ([Abstract])
81 -	In vivo compaction dynamics of bacterial DNA: A fingerprint of DNA/RNA demixing ? M. Joyeux Current Opinion in Colloid & Interface Science, 26 (2016) 17-27 [Abstract] [Ask for an electronic reprint by email] [arXiv preprint]
80 -	Pressure of a gas of underdamped active dumbbells M. Joyeux and E. Bertin Physical Review E, 93 (2016) 032605 (1-11) [full text] copyright : The American Physical Society ([Abstract])
79 -	Compaction of bacterial genomic DNA: Clarifying the concepts M. Joyeux Journal of Physics: Condensed Matter, 27 (2015) 383001 (1-20) [full text] copyright : IOP Publishing Ltd ([Abstract])
78 -	Free-energy landscape and characteristic forces for the initiation of DNA unzipping A. Mentes, A.-M. Florescu, E. Brunk, J. Wereszczynski, M. Joyeux and I. Andricioaei Biophysical Journal, 108 (2015) 1727-1738 [full text] copyright : Elsevier ([Abstract])
77 -	Equilibration of complexes of DNA and H-NS proteins on charged surfaces: A coarse-grained model point of view M. Joyeux Journal of Chemical Physics, 141 (2014) 115102 (1-11) [full text] copyright : The American Institute of Physics ([Abstract])
76 -	Elastic models of the fast traps of carnivorous Dionaea and Aldrovanda M. Joyeux Physical Review E, 88 (2013) 034701 (1-5) [full text] copyright : The American Physical Society ([Abstract])
75 -	A model of H-NS mediated compaction of bacterial DNA M. Joyeux and J. Vreede Biophysical Journal, 104 (2013) 1615-1622 [full text] copyright : Elsevier ([Abstract]) see also the New and Notable by G.S. Freeman and J.J. de Pablo [here]
74 -	At the conjunction of biology, chemistry and physics: the fast movements of Dionaea, Aldrovanda, Utricularia and Stylidium M. Joyeux Frontiers in Life Science, 5 (2011) 71-79 [full text] copyright : Taylor & Francis ([Abstract])
73 -	Different mechanics of snap-trapping in the two closely related carnivorous plants Dionaea muscipula and Aldrovanda vesiculosa S. Poppinga and M. Joyeux Physical Review E, 84 (2011) 041928 (1-7) [full text] copyright : The American Physical Society ([Abstract])
72 -	Thermal and mechanical denaturation properties of a DNA model with three sites per nucleotide A.-M. Florescu and M. Joyeux Journal of Chemical Physics, 135 (2011) 085105 (1-12) [full text] copyright : The American Institute of Physics ([Abstract])
71 -	Ultra-fast underwater suction traps O. Vincent, C. Weisskopf, S. Poppinga, T. Masselter, T. Speck, M. Joyeux, C. Quilliet and P. Marmottant Proceedings of the Royal Society B : Biological Sciences, 278 (2011) 2909-2914 [full text] copyright : The Royal Society ([Abstract])
70 -	Mechanical model of the ultra-fast underwater trap of Utricularia M. Joyeux, O. Vincent and P. Marmottant Physical Review E, 83 (2011) 021911 (1-12) [full text] copyright : The American Physical Society ([Abstract])
69 -	On the Pseudo-Schrödinger Equation approximation of the Transfer-Integral operator for 1-dimensional DNA models M. Joyeux Journal of Nonlinear Mathematical Physics, 18 (2011) 339-357 [full text] copyright : World Scientific Publishing ([Abstract])
68 -	Comparison of kinetic and dynamical models of DNA-protein interaction and facilitated diffusion A.-M. Florescu and M. Joyeux Journal of Physical Chemistry A, 114 (2010) 9662-9672 [full text] copyright : The American Chemical Society ([Abstract])
67 -	Fractional bidromy in the vibrational spectrum of HOCl E. Assémat, K. Efstathiou, M. Joyeux and D. Sugny Physical Review Letters, 104 (2010) 113002 (1-4) [full text] copyright : The American Physical Society ([Abstract])
66 -	Mapping between the order of thermal denaturation and the shape of the critical line of mechanical unzipping in 1-dimensional DNA models S. Buyukdagli and M. Joyeux Chemical Physics Letters, 484 (2010) 315-320 [Abstract] [Ask for an electronic reprint by email] [arXiv preprint]
65 -	Dynamical model of DNA protein interaction: effect of protein charge distribution and mechanical properties A.-M. Florescu and M. Joyeux Journal of Chemical Physics, 131 (2009) 105102 (1-12) [full text] copyright : The American Institute of Physics ([Abstract])
64 -	Modeling of two-dimensional DNA display A.-M. Florescu, M. Joyeux and B. Lafay Electrophoresis, 30 (2009) 3649-3656 [Abstract] [Ask for an electronic reprint by email] [arXiv preprint]
63 -	Energy localization in molecules, bifurcation phenomena, and their spectroscopic signature: the global view S.C. Farantos, R. Schinke, H. Guo and M. Joyeux Chemical Reviews, 109 (2009) 4248-4271 [full text] copyright : The American Chemical Society ([Abstract])
62 -	Description of non-specific DNA-protein interaction and facilitated diffusion with a dynamical model A.-M. Florescu and M. Joyeux Journal of Chemical Physics, 130 (2009) 015103 (1-9) [full text] copyright : The American Institute of Physics ([Abstract])
61 -	Dynamical versus statistical mesoscopic models for DNA denaturation M. Joyeux and A.-M. Florescu Journal of Physics : Condensed Matter, 21 (2009) 034101 (1-12) (special issue on DNA melting) [full text] copyright : Institute of Physics Publishing ([Abstract])
60 -	Comment on "Bubble nucleation and cooperativity in DNA melting" M. Sanrey and M. Joyeux Physical Review Letters, 102 (2009) 029601 (1-1) [full text] copyright : The American Physical Society ([Abstract])
59 -	Statistical physics of the melting of inhomogeneous DNA S. Buyukdagli and M. Joyeux Physical Review E, 77 (2008) 031903 (1-10) [full text] copyright : The American Physical Society ([Abstract])
58 -	Theoretical investigation of finite size effects at DNA melting S. Buyukdagli and M. Joyeux Physical Review E, 76 (2007) 021917 (1-11) [full text] copyright : The American Physical Society ([Abstract])
57 -	1/f fluctuations of DNA temperature at thermal denaturation M. Joyeux, S. Buyukdagli and M. Sanrey Physical Review E, 75 (2007) 061914 (1-9) [full text] copyright : The American Physical Society ([Abstract])
56 -	Slow periodic oscillations in time domain dynamics of NO₂ M. Sanrey and M. Joyeux Journal of Chemical Physics, 126 (2007) 074301 (1-8) [full text] copyright : The American Institute of Physics ([Abstract])
55 -	Quantum mechanical and quasiclassical investigation of the time domain nonadiabatic dynamics of NO₂ close to the bottom of the X²A₁-A²B₂ conical intersection M. Sanrey and M. Joyeux Journal of Chemical Physics, 125 (2006) 014304 (1-8) [full text] copyright : The American Institute of Physics ([Abstract])
54 -	Scaling laws at the phase transition of systems with divergent order parameter and/or internal length : the example of DNA denaturation S. Buyukdagli and M. Joyeux Physical Review E, 73 (2006) 051910 (1-6) [full text] copyright : The American Physical Society ([Abstract])
53 -	Classical and quantum mechanical plane switching in CO₂ M. Sanrey, M. Joyeux and D.A. Sadovskii Journal of Chemical Physics, 124 (2006) 074318 (1-12) [full text] copyright : The American Institute of Physics ([Abstract])
52 -	Towards more realistic dynamical models for DNA secondary structure S. Buyukdagli, M. Sanrey and M. Joyeux Chemical Physics Letters, 419 (2006) 434-438 [Abstract] [Ask for an electronic reprint by email] [arXiv preprint]
51 -	Dynamical model based on finite stacking enthalpies for homogeneous and inhomogeneous DNA thermal denaturation M. Joyeux and S. Buyukdagli Physical Review E, 72 (2005) 051902 (1-5) [full text] copyright : The American Physical Society ([Abstract])
50 -	On the application of canonical perturbation theory up to the dissociation threshold S. Buyukdagli and M. Joyeux Chemical Physics Letters, 412 (2005) 200-205 [Abstract] [Ask for an electronic reprint by email]
49 -	Intramolecular dynamics along isomerization and dissociation pathways M. Joyeux, S. Yu. Grebenshchikov, J. Bredenbeck, R. Schinke and S.C. Farantos Advances in Chemical Physics, 130 (2005) 267-303 [full text] copyright : Wiley ([Abstract])
48 -	Study of vibrational energy localization and redistribution in hydrogen peroxide H₂O₂ at low energy M. Joyeux Journal of Chemical Physics, 122 (2005) 074303 (1-8) [full text] copyright : The American Institute of Physics ([Abstract])
47 -	Dissociation energies of six NO₂ isotopologues by LIF spectroscopy and zero point energy of some triatomic molecules G. Michalski, R. Jost, D. Sugny, M. Joyeux and M. Thiemens Journal of Chemical Physics, 121 (2004) 7153-7161 [full text] copyright : The American Institute of Physics ([Abstract])
46 -	The CO₂ molecule as a quantum realization of the 1:1:2 resonant swing-spring with monodromy R.H. Cushman, H.R. Dullin, A. Giacobbe, D.D. Holm, M. Joyeux, P. Lynch, D.A. Sadovskii and B.I. Zhilinskii Physical Review Letters, 93 (2004) 024302 (1-4) [full text] copyright : The American Physical Society ([Abstract])
45 -	Semiclassical dynamics of the van der Waals states in O₃(X¹A₁) M. Joyeux, R. Schinke and S. Yu. Grebenshchikov Journal of Chemical Physics, 120 (2004) 7426-7437 [full text] copyright : The American Institute of Physics ([Abstract])
44 -	Global bending quantum number and the absence of monodromy in the HCN-CNH molecule K. Efstathiou, M. Joyeux and D.A. Sadovskii Physical Review A, 69 (2004) 032504 (1-15) [full text] copyright : The American Physical Society ([Abstract])
43 -	Monodromy of the LiNC/NCLi molecule M. Joyeux, D.A. Sadovskii and J. Tennyson Chemical Physics Letters, 382 (2003) 439-442 [Abstract] [Ask for an electronic reprint by email]
42 -	Canonical perturbation theory versus Born-Oppenheimer-type separation of motions : the vibrational dynamics of C₃ J. Robert and M. Joyeux Journal of Chemical Physics, 119 (2003) 8761-8762 (note) [full text] copyright : The American Institute of Physics ([Abstract])
41 -	Van der Waals states in ozone and their influence on the threshold spectrum of O₃ (X¹A₁). I. Bound states S. Yu. Grebenshchikov, R. Schinke, P. Fleurat-Lessard and M. Joyeux Journal of Chemical Physics, 119 (2003) 6512-6523 [full text] copyright : The American Institute of Physics ([Abstract])
40 -	An effective model for the X²A₁-A²B₂ conical intersection in NO₂ M. Joyeux, R. Jost and M. Lombardi Journal of Chemical Physics, 119 (2003) 5923-5932 [full text] copyright : The American Institute of Physics ([Abstract])
39 -	The bound state spectrum of HOBr up to the dissociation limit : evolution of saddle-node bifurcations T. Azzam, R. Schinke, S.C. Farantos, M. Joyeux and K.A. Peterson Journal of Chemical Physics, 118 (2003) 9643-9652 [full text] copyright : The American Institute of Physics ([Abstract])
38 -	Canonical perturbation theory for highly excited dynamics M. Joyeux and D. Sugny Canadian Journal of Physics, 80 (2002) 1459-1480 (tutorial article) [full text] copyright : NRC Research Press ([Abstract])
37 -	The X²A₁-A²B₂ conical intersection in NO₂ : determination of the coupling parameter lambda from high resolution experimental data R. Jost, M. Joyeux and M. Jacon Chemical Physics, 283 (2002) 17-28 [Abstract] [Ask for an electronic reprint by email]
36 -	Highly excited motion in molecules : saddle-node bifurcations and their fingerprints in vibrational spectra M. Joyeux, S.C. Farantos and R. Schinke Journal of Physical Chemistry A, 106 (2002) 5407-5421 (feature article) [full text] copyright : The American Chemical Society ([Abstract])
35 -	A local diabatic representation of non-Born-Oppenheimer dynamics M. Joyeux, D. Sugny and M. Lombardi Chemical Physics Letters, 352 (2002) 99-105 [Abstract] [Ask for an electronic reprint by email]
34 -	A new canonical perturbation procedure for studying nonadiabatic dynamics D. Sugny and M. Joyeux Chemical Physics Letters, 337 (2001) 319-326 [Abstract] [Ask for an electronic reprint by email
33 -	Vibrational dynamics up to the dissociation threshold : a case study of 2-dimensional HOCl M. Joyeux, D. Sugny, M. Lombardi, R. Jost, R. Schinke, S. Skokov and J. Bowman Journal of Chemical Physics, 113 (2000) 9610-9621 [full text] copyright : The American Institute of Physics ([Abstract])
32 -	Investigation of the vibrational dynamics of the HCN-CNH isomers through high order canonical perturbation theory D. Sugny, M. Joyeux and E.L. Sibert Journal of Chemical Physics, 113 (2000) 7165-7177 [full text] copyright : The American Institute of Physics ([Abstract])
31 -	The vibrational spectrum of deuterated phosphaethyne : a quantum mechanical, classical and semiclassical analysis J. Bredenbeck, C. Beck, R. Schinke, J. Koput, S. Stamatiadis, S.C. Farantos and M. Joyeux Journal of Chemical Physics, 112 (2000) 8855-8865 [full text] copyright : The American Institute of Physics ([Abstract])
30 -	Semiclassical study of the isomerization states of HCP M. Joyeux, D. Sugny, V. Tyng, M. Kellman, H. Ishikawa, R.W. Field, C. Beck and R. Schinke Journal of Chemical Physics, 112 (2000) 4162-4172 [full text] copyright : The American Institute of Physics ([Abstract])
29 -	On the application of canonical perturbation theory to floppy molecules D. Sugny and M. Joyeux Journal of Chemical Physics, 112 (2000) 31-39 [full text] copyright : The American Institute of Physics ([Abstract])
28 -	Vibrational analysis of HOCl up to 98% of the dissociation energy with a Fermi resonance Hamiltonian R. Jost, M. Joyeux, S. Skokov and J. Bowman Journal of Chemical Physics, 111 (1999) 6807-6820 [full text] copyright : The American Institute of Physics ([Abstract])
27 -	HCP-CPH isomerization : caught in the act H. Ishikawa, R.W. Field, S.C. Farantos, M. Joyeux, J. Koput, C. Beck and R. Schinke Annual Review of Physical Chemistry, 50 (1999) 443-484 [full text] copyright : Annual Reviews
26 -	Analysis of the highly excited vibrational dynamics of HCP using a high order Fermi resonance Hamiltonian M. Joyeux, S. Yu. Grebenshchikov and R. Schinke Journal of Chemical Physics, 109 (1998) 8342-8354 [full text] copyright : The American Institute of Physics ([Abstract])
25 -	Gustavson's procedure and the dynamics of highly excited vibrational states M. Joyeux Journal of Chemical Physics, 109 (1998) 2111-2122 [full text] copyright : The American Institute of Physics ([Abstract])
24 -	Fourier transform of molecular spectra versus classical periodic orbits : the example of CO₂ M. Joyeux and L. Michaille ACH - Models in Chemistry, 134 (1997) 573-594 (invited article) [full text] copyright : Akademiai Kiado, Budapest ([Link])
23 -	On resonance-type effective vibrational Hamiltonians for CO₂. II - Results M. Joyeux Chemical Physics, 221 (1997) 287-301 [Abstract] [Ask for an electronic reprint by email]
22 -	On resonance-type effective vibrational Hamiltonians for CO₂. I - Theoretical background M. Joyeux Chemical Physics, 221 (1997) 269-286 [Abstract] [Ask for an electronic reprint by email]
21 -	Classical dynamics of a non-integrable Hamiltonian near coupling-induced resonance islands M. Joyeux Journal of Physics A, 29 (1996) 5963-5977 [full text] copyright : Institute of Physics Publishing ([Abstract])
20 -	Classical dynamics of the 1:1, 1:2 and 1:3 resonance Hamiltonians M. Joyeux Chemical Physics, 203 (1996) 281-307 [Abstract] [Ask for an electronic reprint by email]
19 -	Semiclassical assignment of the vibrational levels of molecules with Fermi resonance. Application to CS₂ M. Joyeux Journal of Molecular Spectroscopy, 175 (1996) 262-266 [Abstract] [Ask for an electronic reprint by email]
18 -	Application of Berry and Tabor's trace formula to the 2D Fermi resonance Hamiltonian M. Joyeux Chemical Physics Letters, 247 (1995) 454-464 [Abstract] [Ask for an electronic reprint by email
17 -	Semiclassical behavior at a quantum avoided crossing M. Joyeux Journal of Chemical Physics, 102 (1995) 2816-2824 [full text] copyright : The American Institute of Physics ([Abstract] )
16 -	Semiclassical quantization of the spectroscopist's Hamiltonian for coupled vibrational modes M. Joyeux Chemical Physics, 185 (1994) 263-279 [Abstract] [Ask for an electronic reprint by email]
15 -	Measurement of very long (10⁷ s) spin conversion times : dimethyl-s-tetrazine in durene M. Joyeux, B. Prass, C. von Borczyskowski, J.-C. Vial and H.P. Trommsdorff Chemical Physics, 178 (1993) 433-448 [Abstract] [Ask for an electronic reprint by email]
14 -	Vibrational chaos : rational tori, separatrices and Lyapunov exponents M. Joyeux Chemical Physics, 174 (1993) 157-166 [Abstract] [Ask for an electronic reprint by email]
13 -	The transition towards vibrational chaos in triatomic molecules. A numerical and analytical approach M. Joyeux Chemical Physics, 167 (1992) 299-314 [Abstract] [Ask for an electronic reprint by email]
12 -	Intra- inter- polyad mixing and breaking of symmetric-antisymmetric selection rules in the vibrational spectra of the CS₂ molecule J.P. Pique, J. Manners, G. Sitja and M. Joyeux Journal of Chemical Physics, 96 (1992) 6495-6508 [full text] copyright : The American Institute of Physics ([Abstract])
11 -	Optical measurements of methyl group tunneling in molecular crystals : Temperature dependence of the nuclear spin conversion rate C. Hartmann, M. Joyeux, H.P. Trommsdorff, J.C. Vial and C. von Borczyskowski Journal of Chemical Physics, 96 (1992) 6335-6343 [full text] copyright : The American Institute of Physics ([Abstract])
10 -	Numerical studies on the interactions between Fermi polyads : quantum and semiclassical chaos M. Joyeux Chemical Physics, 161 (1992) 11-17 [Abstract] [Ask for an electronic reprint by email]
9 -	Spectroscopy, dynamics and chaos of the CS₂ molecule : Fourier transform and phase-space analysis J.P. Pique, M. Joyeux, J. Manners and G. Sitja Journal of Chemical Physics, 95 (1991) 8744-8752 [full text] copyright : The American Institute of Physics ([Abstract])
8 -	Vibrational study of 3-methyl 4-nitropyridine N-oxide P. Plaza, F. Le Guiner, M. Joyeux, N.Q. Dao, J. Zyss and R. Hierle Journal of Molecular Sructure, 247 (1991) 363-372 [Abstract] [Ask for an electronic reprint by email]
7 -	Calculation of the vibrational force field for 4-nitropyridine N-oxide by the AM1 and MNDO semi-empirical methods M. Joyeux, M.T.C. Martins Costa, D. Rinaldi and N.Q. Dao Spectrochimica Acta, 45A (1989) 967-975 [Abstract] [Ask for an electronic reprint by email]
6 -	Analyse en coordonnées normales des vibrations de la 4-nitropyridine N-oxyde M. Joyeux and N.Q. Dao Spectrochimica Acta, 44A (1988) 1447-1455 [Abstract] [Ask for an electronic reprint by email]
5 -	Vibrational study of 4-nitropyridine N-oxide. III - The charge transfer phenomenon as observed in solution M. Joyeux, G. Menard and N.Q. Dao Journal of Raman Spectroscopy, 19 (1988) 499-502 [Abstract] [Ask for an electronic reprint by email]
4 -	Etude par spectroscopie vibrationnelle du composé 4-nitropyridine N-oxide. II - vibrations internes M. Joyeux and N.Q. Dao Journal of Raman Spectroscopy, 19 (1988) 441-451 [Abstract] [Ask for an electronic reprint by email]
3 -	Raman study of a 4-nitropyridine N-oxide. I - lattice vibrations M. Joyeux, M. Jouan and N.Q. Dao Journal of Raman Spectroscopy, 19 (1988) 133-142 [Abstract] [Ask for an electronic reprint by email]
2 -	Etude in situ et à distance par spectrométrie Raman-laser associée aux fibres optiques de la formation du dépôt calcomagnésien au cours de la protection cathodique d'un acier inoxydable en milieu marin N.Q. Dao, M. Prodhomme, P. Plaza and M. Joyeux Comptes Rendus de l'Académie des Sciences de Paris, Série 2, 302 (1986) 313- 318 [Ask for an electronic reprint by email]
1 -	Cartographie sélective par spectrométrie Raman-laser-fibres-optiques pour analyses à distance et in-situ N.Q. Dao, P. Plaza and M. Joyeux Analusis, 14 (1986) 334-343 [Ask for an electronic reprint by email]